منابع مشابه
Toward perfect reads
We propose a new method to correct short reads using de Bruijn graphs, and implement it as a tool called Bcool. As a first step, Bcool constructs a corrected compacted de Bruijn graph from the reads. This graph is then used as a reference and the reads are corrected according to their mapping on the graph. We show that this approach yields a better correction than kmer-spectrum techniques, whil...
متن کاملIn search of a perfect partnership.
There's no question that our partnership is a natural, given the technological emphasis in modern medicine. My comments are not intended as criticism, but offered in the spirit of broadening our mutual understanding. I believe that open communication will enhance our continued collaboration in this interdisciplinary effort and yield significant advances in medical science.
متن کاملIn search of the perfect orthography
Philologists, linguists, and educators have insisted for several centuries that the ideal orthography has a one-to-one correspondence between grapheme and phoneme. Others, however, have suggested deviations for such functions as distinguishing homophones, displaying popular alternative spellings, and retaining morpheme identity. If, indeed, the one-to-one ideal were accepted, the International ...
متن کاملIn search of the perfect fluid
Shear viscosity measures the amount of internal friction in a simple fluid. In kinetic theory shear viscosity is related to momentum transport by quasi-particles, and the uncertainty relation implies that the ratio of shear viscosity η to entropy density s is bounded by a constant multiplied by h̄/kB, where h̄ is Planck’s constant and kB is Boltzmann’s constant. A specific bound has been proposed...
متن کاملSlideSort: all pairs similarity search for short reads
MOTIVATION Recent progress in DNA sequencing technologies calls for fast and accurate algorithms that can evaluate sequence similarity for a huge amount of short reads. Searching similar pairs from a string pool is a fundamental process of de novo genome assembly, genome-wide alignment and other important analyses. RESULTS In this study, we designed and implemented an exact algorithm SlideSor...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: BMC Bioinformatics
سال: 2015
ISSN: 1471-2105
DOI: 10.1186/1471-2105-16-s17-s7